2021年｜発表論文
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- Hirai S, Tomimatsu K, Miyawaki-Kuwakado A, Takizawa Y, Komatsu T, Tachibana T, Fukushima Y, Takeda Y, Negishi L, Kujirai T, Koyama M, Ohkawa Y, Kurumizaka H
Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant.
Nucleic Acids Res. 2022 Jan 11;50(1):72-91. doi: 10.1093/nar/gkab1137. - Maehara K, Tomimatsu K, Harada A, Tanaka K, Sato S, Fukuoka M, Okada S, Handa T, Kurumizaka H, Saitoh N, Kimura H, Ohkawa Y
Modeling population size independent tissue epigenomes by ChIL-seq with single thin sections.
Mol Syst Biol. 2021 Nov 17. doi: 10.15252/msb.202110323. - Hager LG, Kurumizaka H
Editorial overview: New insights and complexities for chromatin interacting proteins.
Curr Opin Struct Biol. 2021 Dec ;71:59-64. doi: 10.1016/j.sbi.2021.05.011. - Katada S, Takouda J, Nakagawa T, Honda M, Igarashi K, Imamura T, Ohkawa Y, Sato S, Kurumizaka H, Nakashima K
Neural stem/precursor cells dynamically change their epigenetic landscape to differentially respond to BMP signaling for fate switching during brain development.
Genes Dev. 2021 Nov 1;35(21-22):1431-1444. doi: 10.1101/gad.348797.121. - Sato S, Takizawa Y, Hoshikawa F, Dacher M, Tanaka H, Tachiwana H, Kujirai T, Iikura Y, Ho C, Adachi N, Patwal I, Flaus A, Kurumizaka H
Cryo-EM structure of the nucleosome core particle containing Giardia lamblia histones.
Nucleic Acids Res. 2021 Sep 7;49(15):8934-8946. doi: 10.1093/nar/gkab644. - Kagawa W, Kurumizaka H
Structural basis for DNA sequence recognition by pioneer factors in nucleosomes.
Curr Opin Struct Biol. 2021 Dec;71:59-64. doi: 10.1016/j.sbi.2021.05.011. - Ohtomo H, Kurita JI, Sakuraba S, Li Z, Arimura Y, Wakamori M, Tsunaka Y, Umehara T, Kurumizaka H, Kono H, Nishimura Y
The N-terminal tails of histones H2A and H2B adopt two distinct conformations in the nucleosome with contact and reduced contact to DNA.
J Mol Biol. 2021 Jul 23;433(15):167110. doi: 10.1016/j.jmb.2021.167110. - Tachiwana H, Dacher M, Maehara K, Harada A, Seto Y, Katayama R, Ohkawa Y, Kimura H, Kurumizaka H, Saitoh N
Chromatin structure-dependent histone incorporation revealed by a genome-wide deposition assay.
Elife. 2021 May 10;10:e66290. doi: 10.7554/eLife.66290. - Katsumata K, Ichikawa Y, Fuse T, Kurumizaka H, Yanagida A, Urano T, Kato H, Shimizu M
Sequence-dependent nucleosome formation in trinucleotide repeats evaluated by in vivo chemical mapping.
Biochem Biophys Res Commun. 2021 Jun 4;556:179-184. doi: 10.1016/j.bbrc.2021.03.155. - Kurumizaka H, Kujirai T, Takizawa Y
Contributions of histone variants in nucleosome structure and function.
J Mol Biol. 2021 Mar 19;433(6):166678. doi: 10.1016/j.jmb.2020.10.012. - Tjalsma SJD, Hori M, Sato Y, Bousard A, Ohi A, Raposo AC, Roensch J, Le Saux A, Nogami J, Maehara K, Kujirai T, Handa T, Bagés-Arnal S, Ohkawa Y, Kurumizaka H, da Rocha ST, Żylicz JJ, Kimura H, Heard E
H4K20me1 and H3K27me3 are concurrently loaded onto the inactive X chromosome but dispensable for inducing gene silencing.
EMBO Rep. 2021 Mar 3;22(3):e51989. doi: 10.15252/embr.202051989. Epub 2021 Feb 19. - Hirano R, Arimura Y, Kujirai T, Shibata M, Okuda A, Morishima K, Inoue R, Sugiyama M, Kurumizaka H
Histone variant H2A.B-H2B dimers are spontaneously exchanged with canonical H2A-H2B in the nucleosome.
Commun Biol. 2021 Feb 12;4(1):191. doi: 10.1038/s42003-021-01707-z. - Ho CH, Takizawa Y, Kobayashi W, Arimura Y, Kimura H, Kurumizaka H
Structural basis of nucleosomal histone H4 lysine 20 methylation by SET8 methyltransferase.
Life Sci Alliance. 2021 Feb 11;4(4):e202000919. doi: 10.26508/lsa.202000919. - Fujiwara Y, Yamanashi Y, Fujimura A, Sato Y, Kujirai T, Kurumizaka H, Kimura H, Yamatsugu K, Kawashima S, Kanai M
Live-cell epigenome manipulation by synthetic histone acetylation catalyst system.
Proc Natl Acad Sci U S A. 2021 Jan 26;118(4):e2019554118. doi: 10.1073/pnas.2019554118. - Ariyoshi M, Makino F, Watanabe R, Nakagawa R, Kato T, Namba K, Arimura Y, Fujita R, Kurumizaka H, Okumura E, Hara M, Fukagawa T
Cryo-EM structure of the CENP-A nucleosome in complex with phosphorylated CENP-C.
EMBO J. 2021 Mar 1;40(5):e105671. doi: 10.15252/embj.2020105671. Epub 2021 Jan 19.