IQB Annual Report 2021
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302021.5 | Elife.Chromatin structure-dependent histone incorporation revealed by a genome-wide deposition assay.Tachiwana H, Dacher M, Maehara K, Harada A, Seto Y, Katayama R, Ohkawa Y, Kimura H, Kurumizaka H, Saitoh N.2021.5 | EMBO Rep.Dynamic subcellular compartmentalization ensures fidelity of piRNA biogenesis in silkworms.Chung PY, Shoji K, Izumi N, Tomari Y.2021.5 | iScience.Suv4-20h2 protects against influenza virus infection by suppression of chromatin loop formation.Shiimori M, Ichida Y, Nukiwa R, Sakuma T, Abe H, Kajitani R, Fujino Y, Kikuchi A, Kawamura T, Kodama T, Toyooka S, Shirahige K, Schotta G, Kuba K, Itoh T, Imai Y.2021.5 | Sci Rep. CD82 is a marker to isolate β cell precursors from human iPS cells and plays a role for the maturation of β cells.Watanabe A, Tanaka A, Koga C, Matsumoto M, Okazaki Y, Kin T, and Miyajima A.2021.6 | Biochem Biophys Res Commun.Sequence-dependent nucleosome formation in trinucleotide repeats evaluated by in vivo chemical mapping.Katsumata K, Ichikawa Y, Fuse T, Kurumizaka H, Yanagida A, Urano T, Kato H, Shimizu M.2021.6 | Cell Rep.Ribosome stalling caused by the Argonaute-microRNA-SGS3 complex regulates the production of secondary siRNAs in plants.Iwakawa HO, Lam AYW, Mine A, Fujita T, Kiyokawa K, Yoshikawa M, Takeda A, Iwasaki S, Tomari Y.2021.6 | Differentiation.Characterization of the proteome and metabolome of human liver sinusoidal endothelial-like cells derived from induced pluripotent stem cells.Danoy M, Jellali R, Tauran Y, Bruce J, Leduc M, Gilard F, Gakière B, Scheidecker B, Kido T, Miyajima A, Soncin F, Sakai Y, Leclerc E. 2021.6 | Gene.Functional control of Eco1 through the MCM complex in sister chromatid cohesion. Yoshimura A, Sutani T, Shirahige K.2021.6 | Genes Genet Syst.Establishment of an "in saccharo" experimental system.Iida T, Kobayashi T.2021.6 | Nat. Microbiol. (News & View)Gut IgA puts pathogens under pressure.Shinkura R.2021.6 | 栄養乳酸菌および乳酸菌由来代謝産物による腸管免疫制御の新知見森田 直樹2021.7 | J Mol Biol.The N-terminal Tails of Histones H2A and H2B Adopt Two Distinct Conformations in the Nucleosome with Contact and Reduced Contact to DNA.Ohtomo H, Kurita JI, Sakuraba S, Li Z, Arimura Y, Wakamori M, Tsunaka Y, Umehara T, Kurumizaka H, Kono H, Nishimura Y.2021.7 | Methods Mol Biol. Databases for Protein-Protein Interactions.Nakajima N, Akutsu T, Nakato R.2021.7 | Mol Cell.Checkpoint-mediated DNA polymerase ε exonuclease activity curbing counteracts resection-driven fork collapse.Pellicanò G, Al Mamun M, Jurado-Santiago D, Villa-Hernández S, Yin X, Giannattasio M, Lanz MC, Smolka MB, Yeeles J, Shirahige K, García-Díaz M, Bermejo R.2021.7 | Nat Commun.Generation of functional liver organoids on combining hepatocytes and cholangiocytes with hepatobiliary connections ex vivo.Tanimizu N, Ichinohe N, Sasaki Y, Itoh T, Sudo R, Yamaguchi T, Katsuda T, Ninomiya T, Tokino T, Ochiya T, Miyajima A, Mitaka T.2021.7 | Nat Commun.Single-molecule analysis of processive double-stranded RNA cleavage by Drosophila Dicer-2.Naganuma M, Tadakuma H, Tomari Y.2021.7 | Nat Commun.RNase κ promotes robust piRNA production by generating 2',3'-cyclic phosphate-containing precursors.Shigematsu M, Kawamura T, Morichika K, Izumi N, Kiuchi T, Honda S, Pliatsika V, Matsubara R, Rigoutsos I, Katsuma S, Tomari Y, Kirino Y.2021.7 | Nucleic Acids Res. Codependency and mutual exclusivity for gene community detection from sparse single-cell transcriptome data.Nakajima N, Hayashi T, Fujiki K, Shirahige K, Akiyama T, Akutsu T, Nakato R.2021.7 | Sci Rep.W27 IgA suppresses growth of Escherichia in an in vitro model of the human intestinal microbiota.Sasaki K, Mori T, Hoshi N, Sasaki D. Inoue J, Shinkura R, Kondo A.

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